TASUKE

TASUKE is a web-based genome browser that visualizes large-scale resequencing data generated by next-generation sequencing technologies.
The variation and read depth of multiple genomes, as well as annotations, can be shown simultaneously at various scales. The frequency of Variants and Depth of coverage are shown by gradational colors in a block whose size is variable from 1bp to 100kb. Maximally 200 blocks can be shown at one window, so that up to 20 Mb can be viewed.


Screenshot_of_TASUKE_multiple_genome_browser

What's New

Version 1.5.0 was released. (February 22, 2015) New!
Improved general purpose track and view of accessions were implemented. Several bug fixes.

Version 1.4.0 was released. (October 21, 2015)
Making Phylogenetic tree from each sequences. Support for Oracle database as backend database. Some Improvements. Bug fixes.

Version 1.3.1 was released. (May 18, 2015)
Bug fix for exporting as FASTA file.

 About TASUKE

Overview of the tools and usage.

 How to Get & Install

Follow these 4 steps and get TASUKE browser with your own data.

 Examples

Rice 50 resequencing data (Nipponbare reference)
Rice 50 resequencing data (Nipponbare reference)

Rice 50 resequencing data (Kasalath reference)
Rice 50 resequencing data (Kasalath reference)

Human 100 resequencing data (Human 1000 genomes project)
Human 100 resequencing data

CIAT Rice 104 resequencing data (Nipponbare reference)
Rice 104 resequencing data (Nipponbare reference)

 Contact Us

Ask any questions on installing, and we will support you. Bug report, suggestions and any comments are also welcome!!

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